5 Best Shopify Custom Order Fulfillment Apps In 2025

Table of Contents

Last Updated: April 2025

Are you looking to streamline the fulfillment process for your Shopify store in 2025? 

Well, you’re in luck because we’ve compiled a list of the top custom order fulfillment apps that are a must-have for your online business. 

These apps will not only help you manage your inventory and orders more efficiently, but they’ll also improve your overall customer experience. 

So without further ado, let’s dive into the world of Shopify custom order fulfillment apps!

1) Order Automator

Rating:⭐5/5

Pricing: Free; paid plan starts at $10/month with a 7-day free trial.

With Order Automator, you can save time and automate tasks related to orders, customers, and fulfillment while enjoying custom features. 

Features

  1. Fraud Prevention – Protect your business from fraudulent orders by setting up auto-canceling or email notifications.
  2. Amazon FBA Integration – Make your life easier by syncing your inventory and auto-fulfilling your Shopify orders with Amazon FBA. 
  3. Auto Tagging – Automate the task of organizing your orders and customers with the auto-tagging feature. Enables you to filter and export data easily for marketing purposes.

2) ShipStation

Rating:⭐3.8/5

Pricing: Paid plan starts at $9.99/month with a 30-day free trial.

Ship your orders with confidence and automate your processes with ShipStation. Save on top carriers and streamline custom order fulfillment.

Features

  1. Order Management – With the ability to sync orders from all your selling channels, marketplaces, ERPs, and other places, you can easily manage all your orders in one place. 
  2. Automation – By automating your shipping process, you can cut hours out of your day’s work. With features like tagging, splitting, and batching, you can streamline your workflow and get more done in less time.
  3. Exceptional Experience – Deliver an exceptional experience to your customers with custom emails, SMS, and branded tracking.

3) ShipBob Fulfillment

Rating:⭐4.4/5

Pricing: Free.

ShipBob partners with you, a DTC or B2B brand, to fulfill custom orders by picking, packing, and shipping them across 40+ locations worldwide.

Features

  1. Data-Driven Insight – With the built-in reports and analytics, you can gain valuable insights into your supply chain operations, helping you to identify trends, pinpoint areas for improvement, and make informed decisions to stay ahead of the competition.
  2. Omnifulfillment By using a single platform, you can manage multichannel inventory and orders on popular channels like Amazon, Walmart, Facebook, Google, Etsy, eBay, and many more.
  3. B2B FulfillmentYou can ensure a seamless customer experience across all your sales channels.  retailer standards.

4) Envia Shipping and Fulfillment

Rating:⭐4.7/5

Pricing:Free

Are you looking to enhance your logistics process? With this platform, you can instantly quote envelopes, boxes, and cargo shipments. 

Features

  1. Same-day Delivery – With the same-day delivery option, you can enjoy efficient and quick deliveries of your packages. 
  2. On-Demand Delivery – This on-demand delivery option is perfect for busy individuals who need their packages delivered at their convenience. 
  3. Integrate Seamlessly– Integrating your website with Envia will allow you to seamlessly manage all your shipments in one place. 
  4. Dashboard – With this dashboard, you can have a centralized summary of all your shipments. You can easily monitor, analyze, and understand the behavior of your shipments.

5) Order Fulfillment Guru

Rating:⭐5/5

Pricing: Free; paid plan starts at $9.95/month with a 14-day free trial.

If you deal with multiple vendors, warehouses, or suppliers and need to divide orders among them, automate order assignment, or synchronize inventory across your Shopify stores, Order Fulfillment Guru is designed for you. 

Features

  1. Automated Order Management – With advanced rule-based automation, you can easily assign orders to specific locations or partners. 
  2. Real-time Syncing & Tracking – This system allows you to sync orders, products, and inventory in real time between your Shopify stores. 
  3. Built Exclusively for Shopify – Built exclusively for Shopify, so you can keep using Shopify as your order admin.

6) PH MultiCarrier Shipping Label

Rating: ⭐4.9/5

Pricing: $9/Month to $49/month

This app integrates with 70+ carriers (FedEx, UPS, USPS, Canada Post, etc.), offering automated label printing, real-time shipping rates, and tracking notifications, helping merchants streamline fulfillment and reduce costs.

Features

  1. Seamless Shopify Integration – Works directly in the Shopify admin panel.
  2. Global & Local Shipping – Optimized for worldwide merchants.
  3. Automated Label Printing & Real-time Shipping Rates – Reduce manual work and improve efficiency.

Automated order monitoring and tracking

1) Saufter

Rating:⭐5/5

Pricing: Custom pricing.

Saufter’s user-friendly tracking system ensures that your customers are always kept up-to-date with their order’s progress, from processing to delivery. 

Features

  1. Order Shipment Tracking When you use this feature, you will be provided with a unique tracking number that makes it easy for you to monitor the progress of your order.
  2. Detect delivery delays You can monitor the progress of your shipments and identify any potential delays before they start causing inconvenience to your customers.
  3. Automate returns/exchanges/refunds Saufter’s system allows your customers to effortlessly choose the products they want to return or exchange and then guides them through the return process based on your business policies.
  4. Omnichannel support Connect with your customers across multiple channels, including email, social media, and chat.
  5. Smart insights and reports – Saufter offers comprehensive reports and analytics, which include details such as the total number of returns and exchanges processed, the primary reasons for returns, the most commonly returned items, and more.

Conclusion

In conclusion, finding the right Shopify custom order fulfillment app can be a game-changer for your e-commerce business in 2025. 

With the ability to streamline shipping processes, create custom delivery rates, reduce abandoned carts, and improve the overall user experience, these apps are essential for success in today’s competitive market.

In addition, automated order monitoring and tracking have become an essential part of any successful e-commerce business. With Saufter, you can streamline your package tracking processes and improve your overall efficiency. 

Experience the benefits of Saufter firsthand by signing up today, and take advantage of their 15-day free trial and 6-month free credit offer to optimize your workflow and boost productivity.

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